StageLocalized Periodontitis...1	StageNon-end stage-grade G Periodontitis...2	StageReduced periodontium...3	StageLocalized Periodontitis...4	StageNon-end stage-grade G Periodontitis...5	StageReduced periodontium...6	StageLocalized Periodontitis...7	StageNon-end stage-grade G Periodontitis...8	StageReduced periodontium...9	StageLocalized Periodontitis...10	StageNon-end stage-grade G Periodontitis...11	StageReduced periodontium...12	StageLocalized Periodontitis...13	StageNon-end stage-grade G Periodontitis...14	StageReduced periodontium...15	StageLocalized Periodontitis...16	StageNon-end stage-grade G Periodontitis...17	StageReduced periodontium...18
1	Coefficients	Coefficients	Coefficients	Standard Errors	Standard Errors	Standard Errors	Test Statistics W	Test Statistics W	Test Statistics W	p Values	p Values	p Values	Adjusted p Values	Adjusted p Values	Adjusted p Values	Differential Abundance	Differential Abundance	Differential Abundance
Rothia dentocariosa (SP1) 	2.19944050317945	1.34938860454002	2.49590416140964	1.54799617140413	1.06876138692734	1.66601289429632	1.42083071251037	1.26257237681413	1.49813015850867	0.155365979777994	0.206742900301607	0.134099436888791	1	1	1	FALSE	FALSE	FALSE
Capnocytophaga sputigena (SP100) 	1.28529354344039	-0.103181237841449	0.0655448776530025	1.01971551862477	0.765543946769929	0.774615498448733	1.26044325104887	-0.134781599772036	0.0846160163129509	0.207509507476569	0.892784554330966	0.932566665558854	1	1	1	FALSE	FALSE	FALSE
Leptotrichia sp._HMT_212 (SP103) 	1.20215898498278	0.329091957192824	0.0125427564420982	0.864082053727519	0.621720410465158	0.408810849265637	1.39125558712492	0.529324679797153	0.0306810752812194	0.16414793637748	0.596580237989135	0	1	1	0	FALSE	FALSE	TRUE
Actinomyces oris (SP109) 	-0.249387003806731	0.488428092815457	-0.204219194423032	0.488729450451581	0.751058572549836	0.493449307468058	-0.510276193866157	0.650319576484227	-0.413860535078877	0	0.515485814311524	0	0	1	0	TRUE	FALSE	TRUE
Leptotrichia wadei (SP110) 	2.20519867303064	1.54269923169899	0.227802554832787	0.992503988391412	0.789180312821568	0.364450572478495	2.22185371426536	1.95481210901392	0.625057475650497	0.0262931932945348	0.0506052513963898	0	1	1	0	FALSE	FALSE	TRUE
Novosphingobium silvae (SP12) 	-0.0176840440147195	0.795363312869456	1.21799071805333	0.429134097220406	0.77710439035507	0.814249700891063	-0.041208666776336	1.02349610006198	1.49584423146909	0	0.306073342903158	0.134694251937204	0	1	1	TRUE	FALSE	FALSE
Schaalia sp._HMT_180 (SP13) 	0.675087942362522	-0.289367598845046	0.905953885709337	1.36300320035767	0.930819292967149	1.47189384490239	0.49529446606242	-0.310874088054875	0.61550219049215	0.62039227667242	0.755896343859117	0.538223123152573	1	1	1	FALSE	FALSE	FALSE
Gemella haemolysans (SP135) 	0.422677767877209	0.961283937228239	1.07553819819712	0.94974956870309	0.917000614837326	0.974686251526532	0.445041284361295	1.0482914860409	1.10347119035755	0.656289919467451	0.294504331065333	0.269822595927104	1	1	1	FALSE	FALSE	FALSE
Gemella sanguinis (SP136) 	0.831733357898128	-0.0550530473669379	0.253051548297253	0.886411944374367	0.569277917595167	0.652177985367401	0.938314700266329	-0.0967068028907597	0.388009951232404	0.348082707370122	0.922959237230891	0.698008669398003	1	1	1	FALSE	FALSE	FALSE
Kingella oralis (SP152) 	1.75730280259202	0.0488372618779744	1.22312279294505	0.973625419533633	0.533555074257982	0.883665701376171	1.80490645307285	0.0915318103682034	1.38414650590175	0.0710893218320752	0.927070031298637	0.166313599294327	1	1	1	FALSE	FALSE	FALSE
Actinomyces sp._HMT_169 (SP16) 	1.96345524318544	0.819626384789536	1.94203832044344	1.17978626029211	1.03108701581717	1.20396838323923	1.66424657522228	0.794914854145412	1.61303099606192	0.0960631639626603	0.426663033001911	0.106737773856277	1	1	1	FALSE	FALSE	FALSE
Haemophilus parainfluenzae (SP19) 	-1.75965808691718	0.405585805349391	1.46954860287141	0.68429421024238	0.995004956831519	1.42062077521885	-2.57149346082279	0.407621894307877	1.03444116016466	0	0.683551287753812	0.300929970663302	0	1	1	TRUE	FALSE	FALSE
Streptococcus gordonii (SP20) 	-1.87083122290962	-0.612898150006544	-0.234843955030925	0.980143303380252	1.22044332106496	1.41586092686475	-1.90873234195206	-0.502193046926363	-0.165866541391857	0.0562966287574867	0.615531733435043	0.868261978814855	1	1	1	FALSE	FALSE	FALSE
Veillonella parvula (SP21) 	-0.288318789824586	-1.45090576619893	0.941461000638789	1.06009841759947	0.952830262472678	0.6020146622433	-0.271973606448226	-1.52273266639716	1.5638506164129	0.785642313643109	0.127825601819097	0.117852654162534	1	1	1	FALSE	FALSE	FALSE
Fusobacterium nucleatum (SP22) 	-0.487832908386669	1.15209936073397	0.275628306586269	1.28081413003338	1.14485425916763	1.31482813488651	-0.380877206885557	1.00632840512958	0.209630672840796	0.703294366273922	0.314257620865537	0.833955938055239	1	1	1	FALSE	FALSE	FALSE
Eikenella corrodens (SP23) 	-0.431555573608402	0.644507257797985	-0.386387764224703	0.489120875025217	0.784254789188058	0.493836591124697	-0.882308639119425	0.821808507494415	-0.782420280653399	0	0.41118589103419	0	0	1	0	TRUE	FALSE	TRUE
Lancefieldella parvula (SP24) 	-0.140682665223103	-1.00549644099001	-0.137290116850239	0.750309319303517	0.552565816202558	0.759194426378618	-0.187499557320831	-1.81968629167139	-0.180836571081161	0.85126897074063	0	0.856495856746317	1	0	1	FALSE	TRUE	FALSE
Streptococcus sanguinis (SP25) 	1.95694634139968	2.07509169629954	-1.36287691361601	1.47924511425335	1.13516746011377	0.796483682877888	1.32293581539896	1.82800491487975	-1.71111718031888	0.185856723523027	0.0675488140218924	0	1	1	0	FALSE	FALSE	TRUE
Granulicatella adiacens (SP26) 	3.41438103656046	1.70908215287289	2.59023087987685	0.793108577936257	0.90025510600725	1.02979955048297	4.30506128863843	1.89844205433379	2.51527676299921	1.66939511591978e-05	0.0576378741949127	0.0118938974131065	0.00101833102071107	1	0.689846049960177	TRUE	FALSE	FALSE
Campylobacter gracilis (SP28) 	-0.305799317212744	0.890098697276925	1.07178446747527	0.503946759244945	0.813335618127117	1.00321346704438	-0.606808778115604	1.09438056988894	1.06835135560222	0	0.273788101998273	0.285362050902895	0	1	1	TRUE	FALSE	FALSE
Moraxella osloensis (SP29) 	-1.16794415046819	0.176515243259081	0.591693765593239	1.0075915819618	1.22933139397253	1.1886948062146	-1.15914441066903	0.143586378843446	0.497767604013926	0.246397325997536	0.885827097298454	0.618647852191313	1	1	1	FALSE	FALSE	FALSE
Rothia mucilaginosa (SP30) 	1.29816446932412	0.173012370187482	0.0541827746204989	1.44226949063069	1.28383834267303	1.44782572731792	0.900084538816974	0.134761803286899	0.0374235473221434	0.368075263340543	0.892800206841868	0.970147297770958	1	1	1	FALSE	FALSE	FALSE
Streptococcus sp._HMT_074 (SP31) 	1.3093968957995	0.0584195368031279	0.130746855993196	0.671719507094044	0.467039020316591	0.338437201895413	1.94932093228041	0.125084916381349	0.386325307208989	0.0512571103311251	0.900456324488688	0	1	1	0	FALSE	FALSE	TRUE
Schaalia odontolytica (SP32) 	-2.62593788338941	-0.347752299485871	-3.13312514998029	0.842540641010904	1.01310503726506	0.681253175966552	-3.11668987295229	-0.343253943761498	-4.5990613482793	0.00182893861211033	0.731407425774332	0	0.10973631672662	1	0	FALSE	FALSE	TRUE
Neisseria sicca (SP34) 	-1.17735529912628	0.298510555182048	-1.13218748974258	0.582306478084747	0.941441968016735	0.58621702153296	-2.02188253683643	0.317078020019543	-1.93134530072481	0	0.751184402508844	0	0	1	0	TRUE	FALSE	TRUE
Streptococcus anginosus (SP36) 	1.49765920369583	0.264804017800154	1.85237205182145	1.21254531309097	0.833788262237691	1.15748067231136	1.23513668934818	0.31759144352726	1.60034814933234	0.216779636723716	0.750794865441533	0.10952137087879	1	1	1	FALSE	FALSE	FALSE
Acinetobacter johnsonii (SP37) 	-0.517762031747867	0.717358654974244	0.00598595219696907	0.537422978994324	0.911581138766363	0.680413301012271	-0.963416251230552	0.786938896020864	0.00879752378159509	0	0.431317636718726	0.992980682146504	0	1	1	TRUE	FALSE	FALSE
Veillonella atypica (SP38) 	0.153389117436358	-0.191769234651269	-0.617984859707737	0.986098212230582	0.834406451631379	0.632839451310279	0.155551562241845	-0.229827123551519	-0.976527077172913	0.876386507788867	0.818226107269964	0	1	1	0	FALSE	FALSE	TRUE
Streptococcus mitis (SP40) 	1.89482196568727	1.64129224873325	2.63102233489935	1.16426693448932	0.968643821122668	0.878015253177173	1.62748070013548	1.69442287551164	2.99655652379474	0.103635044335791	0.0901849556841514	0.00273047612815739	1	1	0.163828567689443	FALSE	FALSE	FALSE
Campylobacter concisus (SP41) 	1.56791385100212	-0.18072705456281	1.2770891811169	0.850640253223467	0.593879865008285	0.713895386959983	1.8432161481432	-0.304315847718273	1.78890241405704	0.0652974581050551	0.760887272627025	0.0736305329631086	1	1	1	FALSE	FALSE	FALSE
Streptococcus sp._HMT_064 (SP42) 	0.891787222962528	0.0941098216543139	0.871935201408626	1.31344666967731	1.04733925025051	1.40614919544822	0.67896721165057	0.089856101193385	0.620087259752469	0.497158637409965	0.928401566146929	0.535200339470169	1	1	1	FALSE	FALSE	FALSE
Schaalia meyeri (SP46) 	0.405626693094394	-0.954475300619723	-0.965774748209393	1.15459009981715	0.782220594430355	0.70144856853273	0.351316621508043	-1.22021244060291	-1.37682902429978	0.725350826542975	0.222384352006023	0	1	1	0	FALSE	FALSE	TRUE
Abiotrophia defectiva (SP49) 	-1.01320441501857	-0.228713336303814	-0.968036605634876	0.668754659935044	0.918324611400735	0.67214320970737	-1.51506146531672	-0.249055000230207	-1.44022373752214	0	0.803318237420923	0	0	1	0	TRUE	FALSE	TRUE
Streptococcus parasanguinis_clade_411 (SP5) 	0.997014359930143	-0.990845431530273	-0.960736662677802	0.860219353494428	0.913169773299447	1.17906941513184	1.15902340011303	-1.0850615739833	-0.8148262098465	0.246446646934669	0.277894384859355	0.415171795942394	1	1	1	FALSE	FALSE	FALSE
Actinomyces sp._HMT_170 (SP51) 	0.810318976416784	1.08490690108146	2.0296662156827	0.776816887025409	0.767950700374712	1.17677215950305	1.04312739585214	1.41272988038437	1.72477416234918	0.296889293972214	0.157735162340525	0.0845681798107982	1	1	1	FALSE	FALSE	FALSE
Prevotella melaninogenica (SP53) 	-0.192471525807596	-1.368135151317	0.579243041035969	0.807719836979535	0.60314850593267	0.904769269278632	-0.238289957725123	-2.26832220897473	0.640210781581692	0.811656209628532	0	0.522035574352954	1	0	1	FALSE	TRUE	FALSE
Agrobacterium tumefaciens (SP55) 	0.049499790815473	0.87310057011166	1.1282911263875	0.388567420197861	0.775910837409359	0.740695046370588	0.127390481657642	1.12525889318263	1.52328698823644	0	0.260479343411317	0.127686921051949	0	1	1	TRUE	FALSE	FALSE
Streptococcus parasanguinis (SP56) 	-0.100687251732825	-0.991817628820599	-0.0355589291697532	0.956743348652591	0.769680198430389	0.82985894424381	-0.105239562809217	-1.28861003679608	-0.0428493654450582	0.916185718425866	0.197533692338434	0.965821612165801	1	1	1	FALSE	FALSE	FALSE
Bergeyella sp._HMT_322 (SP57) 	0.859830059566985	0.171592993807092	0.323156380535433	0.88977923063612	0.769717339760949	0.924336784225227	0.966340896665205	0.222929879506656	0.349608915333063	0.333873628158491	0.823590081020774	0.726632219221575	1	1	1	FALSE	FALSE	FALSE
Campylobacter showae (SP59) 	0.0362380024754966	0.931919383538551	0.0814058118591962	0.426996159368253	0.707158550678886	0.432483019090814	0.0848672796708786	1.31783654831563	0.188228920595151	0	0.187558370238595	0	0	1	0	TRUE	FALSE	TRUE
Streptococcus oralis_subsp._tigurinus_clade_070 (SP6) 	-0.28439754671205	1.28949269017973	2.9972168847499	0.493474187995757	0.902589798332258	1.11244801818258	-0.576316965771055	1.42865861387128	2.69425342646256	0	0.153102378461568	0.00705465025532004	0	1	0.416224365063883	TRUE	FALSE	FALSE
Actinomyces graevenitzii (SP60) 	0.00816528989173354	-0.548573909431238	-0.550206117887355	0.795936515772404	0.70576024845124	0.574915551270344	0.0102587200485577	-0.777280826789352	-0.957020760130091	0.991814869228926	0.436993104431111	0	1	1	0	FALSE	FALSE	TRUE
Leptotrichia sp._HMT_215 (SP61) 	1.25444263922897	0.737989546167011	1.22993607558859	1.0145529729977	0.725106823520885	0.867388113342012	1.23644863562172	1.0177666548269	1.4179766319943	0.216291847228045	0.308788862210421	0.156197587306226	1	1	1	FALSE	FALSE	FALSE
Streptococcus sp._HMT_066 (SP63) 	0.599691171367548	-0.287679853085506	0.17150149794198	0.74216926157426	0.504646393975026	0.565567818773075	0.808024802988347	-0.570062238668733	0.303237723663326	0.419076303986803	0.56863548554987	0.761708702245401	1	1	1	FALSE	FALSE	FALSE
Schaalia odontolyticus (SP68) 	1.28546232456299	-0.281999306105299	1.22420947037289	0.875288473355372	0.431473739651157	0.796461168765608	1.46861562067102	-0.653572350273954	1.53706108769901	0.141937075561211	0	0.124278350752198	1	0	1	FALSE	TRUE	FALSE
Prevotella salivae (SP69) 	-0.125459491057938	0.153534385625437	-0.482651159782763	0.597930586394184	0.721274654041737	0.482226170664619	-0.209822835480822	0.21286535547186	-1.00088130662332	0.833805949635841	0.831431985397987	0	1	1	0	FALSE	FALSE	TRUE
Streptococcus intermedius (SP7) 	0.749201311492179	1.50976691997303	1.1726559863714	0.761300100501451	0.861685990145245	1.07509830566193	0.98410772702998	1.75210800365751	1.09074303270286	0.325062548068299	0.0797552382950352	0.275385969557356	1	1	1	FALSE	FALSE	FALSE
Neisseria mucosa (SP77) 	-0.185799442674427	0.822170406385502	-0.140631633290728	0.462021500267585	0.809357848535754	0.467043488849587	-0.402144581078628	1.01583052276929	-0.301110360487262	0	0.309710098392824	0	0	1	0	TRUE	FALSE	TRUE
Streptococcus salivarius (SP79) 	3.20954153498522	-0.171238893538053	0.606998652245148	1.09801347611318	1.20423744096068	1.17425573697745	2.92304384673545	-0.142196951957786	0.516922023994169	0.00346627700773713	0.886924439311768	0.605210592633597	0.204510343456491	1	1	FALSE	FALSE	FALSE
Capnocytophaga gingivalis (SP82) 	1.84748155144312	1.7488837394044	0.367987000353507	0.946423498036099	0.919634217144561	0.798364991351094	1.95206644306358	1.90171668996249	0.460925772472504	0.0509303166552493	0.0572082027277225	0.644851860562082	1	1	1	FALSE	FALSE	FALSE
Lachnoanaerobaculum orale (SP83) 	1.08808580948145	0.074400740401354	0.275392086880738	1.02464810789663	0.719003111932745	0.792772677594995	1.06191169543566	0.103477633360109	0.347378378019011	0.288275775129792	0.91758390018269	0.728307074999427	1	1	1	FALSE	FALSE	FALSE
Acinetobacter lwoffii (SP87) 	-0.458494915882402	0.0338066514759189	0.132853875059675	0.473571822431803	0.680420329127275	0.709503030418933	-0.968163421396187	0.0496849521225802	0.187249200304655	0	0.960373448115306	0.851465250705014	0	1	1	TRUE	FALSE	FALSE
Lautropia mirabilis (SP88) 	-0.536988755341093	0.76106792642828	-0.491820945957393	0.604861450632862	0.915847598395502	0.608619447606318	-0.887788029439213	0.830998440965086	-0.8080927218013	0	0.405974510087674	0	0	1	0	TRUE	FALSE	TRUE
Streptococcus chosunense (SP90) 	-0.00292702175398363	1.06598542779863	2.09924007492262	0.416547430126629	0.748583709999077	0.893824512474354	-0.00702686307077641	1.42400297195881	2.34860427927999	0	0.15444561175724	0.0188439218033227	0	1	1	TRUE	FALSE	FALSE
Streptococcus oralis (SP91) 	-1.09746352572332	-1.68975519129849	-0.766548121255235	1.13021031114533	0.924217508470161	1.21360993821251	-0.97102593641282	-1.82830900281852	-0.631626437061205	0.331535363138533	0.0675031894396691	0.527631007297817	1	1	1	FALSE	FALSE	FALSE
Prevotella histicola (SP93) 	0.692245621037115	-0.136000692440126	0.718741866203329	0.965779064139019	0.758157099927859	0.961959316637462	0.716774308681297	-0.17938326034679	0.747164514935723	0.473513366488742	0.857636774505184	0.454964260985143	1	1	1	FALSE	FALSE	FALSE
Stomatobaculum longum (SP95) 	1.87466760623278	-0.621357332883145	0.263540415334689	1.10304494796869	0.53561550068984	0.739393177885064	1.69953872658142	-1.16008093881315	0.356427977992049	0.0892177242206763	0	0.721520079944328	1	0	1	FALSE	TRUE	FALSE
Micrococcus antarcticus (SP98) 	0.27969158896422	1.12726445479352	1.16593797498351	0.313207539323277	0.679823934076052	0.593277329770391	0.892991240148715	1.65817117975639	1.9652494988048	0	0.0972829201234572	0.0493853674830664	0	1	1	TRUE	FALSE	FALSE
Streptococcus parasanguinis_clade_411_nov_97.661% (SPN72) 	0.369361774750748	-0.133729702606192	0.315681377868964	0.694569112265678	0.541662751271548	0.718903040754345	0.531785488626024	-0.246887389417608	0.439115374359413	0.59487457445348	0.80499537607603	0.660577939551447	1	1	1	FALSE	FALSE	FALSE
Veillonella dispar_parvula (SPP10) 	-2.91651413370575	1.08409800613591	0.408205755954505	1.18495786297937	1.13944881528544	1.42387249154157	-2.46128088164476	0.951423171969631	0.286687016133415	0.0138441934319178	0.341389602032102	0.77435198009905	0.789119025619313	1	1	FALSE	FALSE	FALSE
Streptococcus infantis_infantis_clade_638 (SPP2) 	0.464392051240544	0.0219728942093464	0.0699707978903141	1.21994345611466	0.877558436800204	0.883274631892992	0.380666865265679	0.0250386678401327	0.0792174883822441	0.703450458643445	0.980024120791689	0.936859634588185	1	1	1	FALSE	FALSE	FALSE
